Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 16 glycosylhydrolase | ALPR1_RS01445 | Not Available | Positive | 317433 - 318290 | 33475.1 |
| 23s rrna pseudouridine(2604) synthase rluf | ALPR1_RS01450 | Not Available | Negative | 318295 - 319026 | 27651.8 |
| gliding motility lipoprotein gldj | ALPR1_RS01455 | Not Available | Negative | 319112 - 320335 | 46606.3 |
| transcription-repair coupling factor | ALPR1_RS01460 | Not Available | Negative | 320513 - 323866 | 127879.0 |
| heme-copper oxidase subunit iii | ALPR1_RS01465 | Not Available | Positive | 323990 - 324604 | 23837.8 |
| srpbcc family protein | ALPR1_RS01470 | Not Available | Positive | 324612 - 325055 | 17612.5 |
| fur family transcriptional regulator | ALPR1_RS01475 | Not Available | Negative | 325052 - 325525 | 18145.8 |
| aspartyl protease family protein | ALPR1_RS01480 | Not Available | Positive | 325736 - 326989 | 47936.1 |
| lema family protein | ALPR1_RS01485 | Not Available | Positive | 327106 - 327696 | 22048.0 |
| tpm domain-containing protein | ALPR1_RS01490 | Not Available | Positive | 327706 - 328143 | 16076.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
