Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator | ALPR1_RS00100 | Not Available | Positive | 21395 - 21805 | 15639.7 |
| hypothetical protein | ALPR1_RS00105 | Not Available | Negative | 21802 - 22029 | 8095.73 |
| ycxb family protein | ALPR1_RS00110 | Not Available | Positive | 22181 - 22654 | 18631.4 |
| hypothetical protein | ALPR1_RS00115 | Not Available | Negative | 22772 - 23548 | 30669.9 |
| sgnh/gdsl hydrolase family protein | ALPR1_RS00120 | Not Available | Negative | 23843 - 24502 | 24836.5 |
| s41 family peptidase | ALPR1_RS00125 | Not Available | Negative | 24632 - 27757 | 119278.0 |
| fasciclin domain-containing protein | ALPR1_RS00130 | Not Available | Negative | 27859 - 28365 | 17746.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | ALPR1_RS00135 | Not Available | Positive | 28522 - 28995 | 18236.2 |
| hypothetical protein | ALPR1_RS00140 | Not Available | Positive | 29213 - 29968 | 29046.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | ALPR1_RS00145 | Not Available | Negative | 30101 - 30616 | 19328.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
