Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | ALPR1_RS14860 | Not Available | Negative | 3542064 - 3543548 | 56728.2 |
| sulfatase | ALPR1_RS14865 | Not Available | Negative | 3543642 - 3545117 | 56564.0 |
| d-aminoacyl-trna deacylase | ALPR1_RS14870 | Not Available | Negative | 3545204 - 3545656 | 16329.0 |
| nad-dependent epimerase/dehydratase family protein | ALPR1_RS14875 | Not Available | Negative | 3545653 - 3546366 | 26544.3 |
| thioredoxin family protein | ALPR1_RS14880 | Not Available | Negative | 3546363 - 3546989 | 24036.1 |
| ykva family protein | ALPR1_RS14885 | Not Available | Negative | 3547021 - 3547434 | 15410.0 |
| hypothetical protein | ALPR1_RS14890 | Not Available | Negative | 3547439 - 3547960 | 19759.1 |
| hesb/isca family protein | ALPR1_RS14895 | Not Available | Positive | 3548072 - 3548386 | 11661.2 |
| duf6265 family protein | ALPR1_RS14900 | Not Available | Positive | 3548419 - 3548922 | 19497.5 |
| duf4136 domain-containing protein | ALPR1_RS14905 | Not Available | Positive | 3549050 - 3549544 | 17943.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
