Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain-containing protein | ALPR1_RS14760 | Not Available | Negative | 3519068 - 3522937 | 148355.0 |
| sdr family oxidoreductase | ALPR1_RS14765 | Not Available | Negative | 3522938 - 3523750 | 29268.5 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | ALPR1_RS14770 | Not Available | Positive | 3523859 - 3525265 | 53327.1 |
| hypothetical protein | ALPR1_RS14775 | Not Available | Positive | 3525262 - 3525639 | 14675.3 |
| thiamine-phosphate kinase | ALPR1_RS14780 | Not Available | Negative | 3525789 - 3526817 | 36971.2 |
| methylmalonyl-coa epimerase | ALPR1_RS14785 | Not Available | Negative | 3526916 - 3527332 | 15608.6 |
| hesb/isca family protein | ALPR1_RS14790 | Not Available | Positive | 3527429 - 3527755 | 11831.2 |
| glycine cleavage system aminomethyltransferase gcvt | ALPR1_RS14795 | Not Available | Positive | 3527911 - 3529005 | 40116.9 |
| 2-phosphosulfolactate phosphatase | ALPR1_RS14800 | Not Available | Positive | 3529005 - 3529715 | 25690.8 |
| sdr family nad(p)-dependent oxidoreductase | ALPR1_RS14805 | Not Available | Negative | 3529720 - 3530478 | 26648.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
