Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | ALPR1_RS14710 | Not Available | Positive | 3505176 - 3506741 | 56865.9 |
| imidazolonepropionase | ALPR1_RS14715 | Not Available | Positive | 3506754 - 3508004 | 45326.1 |
| urocanate hydratase | ALPR1_RS14720 | Not Available | Positive | 3508069 - 3510069 | 74570.7 |
| formimidoylglutamase | ALPR1_RS14725 | Not Available | Positive | 3510188 - 3511165 | 36658.6 |
| mechanosensitive ion channel family protein | ALPR1_RS14730 | Not Available | Positive | 3511299 - 3512120 | 30022.8 |
| 6-bladed beta-propeller | ALPR1_RS14735 | Not Available | Positive | 3512219 - 3513409 | 44725.6 |
| fad-binding and (fe-s)-binding domain-containing protein | ALPR1_RS14740 | Not Available | Negative | 3513429 - 3516365 | 108005.0 |
| ydcf family protein | ALPR1_RS14745 | Not Available | Positive | 3516536 - 3517306 | 29591.2 |
| type ii toxin-antitoxin system hipa family toxin | ALPR1_RS14750 | Not Available | Negative | 3517312 - 3518616 | 49033.9 |
| helix-turn-helix domain-containing protein | ALPR1_RS14755 | Not Available | Negative | 3518610 - 3518945 | 12795.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
