Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nif3-like dinuclear metal center hexameric protein | ALPR1_RS14660 | Not Available | Positive | 3495689 - 3496789 | 40782.3 |
| zinc ribbon domain-containing protein | ALPR1_RS14665 | Not Available | Positive | 3496793 - 3497560 | 29268.2 |
| hypothetical protein | ALPR1_RS14670 | Not Available | Positive | 3497673 - 3498092 | 15792.2 |
| histidine phosphatase family protein | ALPR1_RS14675 | Not Available | Negative | 3498076 - 3498699 | 23532.4 |
| hotdog fold thioesterase | ALPR1_RS14680 | Not Available | Positive | 3498753 - 3499175 | 15330.8 |
| chorismate-binding protein | ALPR1_RS14685 | Not Available | Positive | 3499175 - 3500392 | 45750.3 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | ALPR1_RS14690 | Not Available | Positive | 3500389 - 3502077 | 63283.6 |
| family 16 glycosylhydrolase | ALPR1_RS14695 | Not Available | Negative | 3502083 - 3503204 | 41385.4 |
| helix-turn-helix domain-containing protein | ALPR1_RS20415 | Not Available | Negative | 3503273 - 3504058 | 28777.8 |
| lysr family transcriptional regulator | ALPR1_RS14705 | Not Available | Negative | 3504214 - 3505083 | 32788.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
