Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase | ALPR1_RS14560 | Not Available | Positive | 3464439 - 3465884 | 53489.2 |
| fad-dependent oxidoreductase | ALPR1_RS14565 | Not Available | Negative | 3465936 - 3467810 | 69125.3 |
| rok family protein | ALPR1_RS14570 | Not Available | Negative | 3467807 - 3468667 | 31040.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALPR1_RS14575 | Not Available | Negative | 3468812 - 3470410 | 56643.9 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS14580 | Not Available | Negative | 3470413 - 3473478 | 109550.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALPR1_RS14585 | Not Available | Negative | 3473880 - 3475466 | 60002.1 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS14590 | Not Available | Negative | 3475492 - 3478803 | 120905.0 |
| glutamine synthetase iii | ALPR1_RS14595 | Not Available | Negative | 3479261 - 3481423 | 80302.5 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | ALPR1_RS14600 | Not Available | Positive | 3481657 - 3482976 | 49970.9 |
| alpha amylase c-terminal domain-containing protein | ALPR1_RS14605 | Not Available | Positive | 3483088 - 3485106 | 78405.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
