Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3276 family protein | ALPR1_RS14460 | Not Available | Positive | 3439765 - 3440088 | 12920.8 |
| ai-2e family transporter | ALPR1_RS14465 | Not Available | Positive | 3440171 - 3441256 | 40903.4 |
| redox-regulated atpase ychf | ALPR1_RS14470 | Not Available | Positive | 3441263 - 3442360 | 40264.3 |
| crispr-associated endoribonuclease cas6 | ALPR1_RS14475 | Not Available | Positive | 3442455 - 3443363 | 34771.5 |
| duf5103 domain-containing protein | ALPR1_RS14480 | Not Available | Negative | 3443404 - 3444678 | 48973.0 |
| abc-f family atp-binding cassette domain-containing protein | ALPR1_RS14485 | Not Available | Negative | 3444720 - 3446642 | 72805.6 |
| pqq-dependent sugar dehydrogenase | ALPR1_RS14490 | Not Available | Positive | 3446765 - 3447937 | 42718.9 |
| abc1 kinase family protein | ALPR1_RS14495 | Not Available | Negative | 3447969 - 3449288 | 50575.1 |
| tetr family transcriptional regulator c-terminal domain-containing protein | ALPR1_RS14500 | Not Available | Negative | 3449292 - 3449957 | 26153.1 |
| atp-dependent protease subunit hslv | ALPR1_RS14505 | Not Available | Negative | 3450067 - 3450606 | 19324.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
