Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component regulator propeller domain-containing protein | ALPR1_RS14160 | Not Available | Negative | 3377673 - 3378800 | 41629.9 |
| winged helix-turn-helix domain-containing protein | ALPR1_RS14165 | Not Available | Positive | 3378918 - 3379805 | 33042.2 |
| polyketide cyclase | ALPR1_RS14170 | Not Available | Negative | 3379955 - 3380851 | 34365.9 |
| cpbp family intramembrane glutamic endopeptidase | ALPR1_RS14175 | Not Available | Negative | 3380943 - 3381740 | 30222.0 |
| nuclear transport factor 2 family protein | ALPR1_RS20410 | Not Available | Negative | 3381872 - 3382630 | 29006.6 |
| yip1 family protein | ALPR1_RS14185 | Not Available | Negative | 3383016 - 3383561 | 20534.1 |
| frg domain-containing protein | ALPR1_RS14190 | Not Available | Negative | 3383704 - 3384723 | 39819.7 |
| hypothetical protein | ALPR1_RS14195 | Not Available | Negative | 3384959 - 3385375 | 15892.9 |
| is110 family transposase | ALPR1_RS14200 | Not Available | Positive | 3385660 - 3386715 | 41043.8 |
| hypothetical protein | ALPR1_RS14205 | Not Available | Negative | 3386712 - 3386900 | 7032.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
