Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | ALPR1_RS13960 | Not Available | Negative | 3341557 - 3342246 | 27076.8 |
| orotate phosphoribosyltransferase | ALPR1_RS13965 | Not Available | Positive | 3342344 - 3342988 | 23361.3 |
| hypothetical protein | ALPR1_RS13970 | Not Available | Negative | 3343146 - 3343664 | 19810.9 |
| gamma carbonic anhydrase family protein | ALPR1_RS13975 | Not Available | Negative | 3343757 - 3344269 | 18234.2 |
| ycei family protein | ALPR1_RS13980 | Not Available | Positive | 3344418 - 3345143 | 26208.5 |
| anthranilate synthase component i family protein | ALPR1_RS13985 | Not Available | Positive | 3345209 - 3346465 | 47778.3 |
| dna polymerase iv | ALPR1_RS13990 | Not Available | Positive | 3346446 - 3347543 | 41682.4 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | ALPR1_RS13995 | Not Available | Positive | 3347642 - 3349120 | 55736.3 |
| sigma-54-dependent transcriptional regulator | ALPR1_RS14000 | Not Available | Positive | 3349117 - 3350406 | 48557.9 |
| lps assembly lipoprotein lpte | ALPR1_RS14005 | Not Available | Positive | 3350390 - 3350935 | 20589.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
