Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose:h+ symporter permease | ALPR1_RS13860 | Not Available | Positive | 3321071 - 3322387 | 48067.0 |
| l-rhamnose mutarotase | ALPR1_RS13865 | Not Available | Positive | 3322540 - 3322860 | 12339.8 |
| alpha/beta hydrolase | ALPR1_RS13870 | Not Available | Positive | 3323077 - 3323991 | 33862.6 |
| had family hydrolase | ALPR1_RS13875 | Not Available | Positive | 3324180 - 3324869 | 26699.5 |
| abc transporter atp-binding protein | ALPR1_RS13880 | Not Available | Negative | 3324955 - 3326700 | 63634.9 |
| helix-turn-helix domain-containing protein | ALPR1_RS13885 | Not Available | Positive | 3326939 - 3328732 | 68324.0 |
| nad(p)-dependent alcohol dehydrogenase | ALPR1_RS13890 | Not Available | Positive | 3328853 - 3329827 | 35219.7 |
| duf4386 domain-containing protein | ALPR1_RS13895 | Not Available | Positive | 3329865 - 3330539 | 24598.5 |
| gh39 family glycosyl hydrolase | ALPR1_RS13900 | Not Available | Positive | 3330873 - 3332579 | 64909.5 |
| hypothetical protein | ALPR1_RS13905 | Not Available | Positive | 3332659 - 3333657 | 37566.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
