Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 43 protein | ALPR1_RS13760 | Not Available | Positive | 3291259 - 3292269 | 38458.9 |
| pqq-dependent sugar dehydrogenase | ALPR1_RS13765 | Not Available | Positive | 3292339 - 3293514 | 43291.0 |
| hyr domain-containing protein | ALPR1_RS20400 | Not Available | Negative | 3293675 - 3298048 | 148254.0 |
| transporter substrate-binding domain-containing protein | ALPR1_RS13775 | Not Available | Positive | 3298877 - 3299968 | 40480.7 |
| alanine/glycine:cation symporter family protein | ALPR1_RS13780 | Not Available | Positive | 3300265 - 3301686 | 50965.9 |
| efflux rnd transporter permease subunit | ALPR1_RS13785 | Not Available | Negative | 3301834 - 3305007 | 114687.0 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS13790 | Not Available | Negative | 3305038 - 3306150 | 40871.6 |
| tolc family protein | ALPR1_RS13795 | Not Available | Negative | 3306182 - 3307501 | 50634.7 |
| tetr/acrr family transcriptional regulator | ALPR1_RS13800 | Not Available | Negative | 3307546 - 3308121 | 22155.3 |
| ai-2e family transporter | ALPR1_RS13805 | Not Available | Negative | 3308255 - 3309340 | 40791.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
