Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss-dependent choice-of-anchor j family protein | ALPR1_RS13610 | Not Available | Positive | 3256196 - 3259270 | 112816.0 |
| pasta domain-containing protein | ALPR1_RS13615 | Not Available | Positive | 3259415 - 3260155 | 27064.9 |
| t9ss type a sorting domain-containing protein | ALPR1_RS13620 | Not Available | Positive | 3260160 - 3261986 | 69408.6 |
| rhodanese-like domain-containing protein | ALPR1_RS13625 | Not Available | Positive | 3261990 - 3262286 | 11352.5 |
| site-2 protease family protein | ALPR1_RS13630 | Not Available | Negative | 3262311 - 3263420 | 41358.0 |
| had family hydrolase | ALPR1_RS13635 | Not Available | Negative | 3263413 - 3264042 | 24320.0 |
| Trna-met | Not Available | Not Available | Positive | 3264146 - 3264222 | Not Available |
| giy-yig nuclease family protein | ALPR1_RS13645 | Not Available | Positive | 3264281 - 3264571 | 11397.0 |
| giy-yig nuclease family protein | ALPR1_RS13650 | Not Available | Positive | 3264707 - 3264997 | 11386.9 |
| giy-yig nuclease family protein | ALPR1_RS13655 | Not Available | Positive | 3265136 - 3265426 | 11521.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
