Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | ALPR1_RS13415 | Not Available | Positive | 3205678 - 3206226 | 20381.7 |
| branched-chain amino acid aminotransferase | ALPR1_RS13420 | Not Available | Positive | 3206270 - 3207337 | 39230.7 |
| hypothetical protein | ALPR1_RS13425 | Not Available | Positive | 3207428 - 3207934 | 18981.4 |
| peptide chain release factor 2 | ALPR1_RS13430 | Not Available | Positive | 3208002 - 3209103 | 41648.9 |
| mfs transporter | ALPR1_RS13435 | Not Available | Positive | 3209150 - 3210328 | 42659.4 |
| m24 family metallopeptidase | ALPR1_RS13440 | Not Available | Negative | 3210325 - 3211677 | 51276.1 |
| mate family efflux transporter | ALPR1_RS13445 | Not Available | Negative | 3211746 - 3213104 | 49851.1 |
| nudix domain-containing protein | ALPR1_RS13450 | Not Available | Negative | 3213108 - 3213650 | 20210.3 |
| lrp/asnc family transcriptional regulator | ALPR1_RS13455 | Not Available | Negative | 3213711 - 3214193 | 17771.0 |
| tetratricopeptide repeat protein | ALPR1_RS13460 | Not Available | Negative | 3214402 - 3215607 | 47086.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
