Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | ALPR1_RS13320 | Not Available | Negative | 3181279 - 3183957 | 99055.0 |
| homocysteine s-methyltransferase family protein | ALPR1_RS13325 | Not Available | Negative | 3183980 - 3185032 | 38196.3 |
| hypothetical protein | ALPR1_RS13330 | Not Available | Negative | 3185279 - 3186595 | 49364.2 |
| response regulator | ALPR1_RS20390 | Not Available | Negative | 3186664 - 3187059 | 14909.1 |
| pas domain s-box protein | ALPR1_RS13335 | Not Available | Negative | 3187074 - 3190925 | 147435.0 |
| ybjq family protein | ALPR1_RS13340 | Not Available | Positive | 3191147 - 3191467 | 11266.5 |
| (2fe-2s) ferredoxin domain-containing protein | ALPR1_RS13345 | Not Available | Negative | 3191488 - 3191730 | 8919.47 |
| duf819 domain-containing protein | ALPR1_RS13350 | Not Available | Negative | 3191731 - 3192984 | 44339.0 |
| nudix hydrolase | ALPR1_RS13355 | Not Available | Negative | 3193040 - 3193681 | 23833.9 |
| hypothetical protein | ALPR1_RS13360 | Not Available | Negative | 3193671 - 3194366 | 26668.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
