Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | ALPR1_RS13270 | Not Available | Positive | 3170729 - 3172471 | 64562.6 |
| ftsx-like permease family protein | ALPR1_RS13275 | Not Available | Negative | 3172624 - 3175230 | 98400.0 |
| padr family transcriptional regulator | ALPR1_RS13280 | Not Available | Negative | 3175223 - 3175561 | 12286.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | ALPR1_RS13285 | Not Available | Positive | 3175759 - 3176463 | 26996.5 |
| merr family transcriptional regulator | ALPR1_RS13290 | Not Available | Positive | 3176551 - 3176904 | 13920.8 |
| dna-processing protein dpra | ALPR1_RS13295 | Not Available | Positive | 3176885 - 3178006 | 40651.3 |
| pepsy domain-containing protein | ALPR1_RS13300 | Not Available | Negative | 3178003 - 3178554 | 21168.9 |
| hydroxymethylglutaryl-coa lyase | ALPR1_RS13305 | Not Available | Negative | 3178556 - 3179410 | 31153.3 |
| hypothetical protein | ALPR1_RS13310 | Not Available | Positive | 3179732 - 3180256 | 20282.3 |
| methylenetetrahydrofolate reductase | ALPR1_RS13315 | Not Available | Negative | 3180329 - 3181282 | 36093.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
