Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ALPR1_RS13120 | Not Available | Positive | 3141455 - 3142039 | 22048.6 |
| duf5690 family protein | ALPR1_RS13125 | Not Available | Negative | 3142029 - 3143324 | 49327.0 |
| zinc-binding dehydrogenase | ALPR1_RS13130 | Not Available | Positive | 3143625 - 3144734 | 40500.5 |
| phosphonatase-like hydrolase | ALPR1_RS13135 | Not Available | Positive | 3144756 - 3145448 | 25089.0 |
| duf937 domain-containing protein | ALPR1_RS13140 | Not Available | Positive | 3145873 - 3146376 | 17449.0 |
| hypothetical protein | ALPR1_RS13145 | Not Available | Positive | 3146382 - 3146783 | 15100.7 |
| hypothetical protein | ALPR1_RS13150 | Not Available | Positive | 3146780 - 3147169 | 14073.2 |
| m14 family metallopeptidase | ALPR1_RS13155 | Not Available | Negative | 3147244 - 3148494 | 47918.8 |
| gfo/idh/moca family protein | ALPR1_RS13160 | Not Available | Negative | 3148565 - 3149905 | 49542.1 |
| duf1080 domain-containing protein | ALPR1_RS13165 | Not Available | Negative | 3149980 - 3150747 | 27942.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
