Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | ALPR1_RS13040 | Not Available | Positive | 3121372 - 3122679 | 50695.5 |
| hypothetical protein | ALPR1_RS13045 | Not Available | Positive | 3122844 - 3123203 | 13297.7 |
| s66 peptidase family protein | ALPR1_RS13050 | Not Available | Positive | 3123357 - 3124397 | 37457.9 |
| sgnh/gdsl hydrolase family protein | ALPR1_RS13055 | Not Available | Positive | 3124401 - 3125123 | 26708.7 |
| duf4377 domain-containing protein | ALPR1_RS20365 | Not Available | Positive | 3125120 - 3125797 | 25208.2 |
| fumarylacetoacetate hydrolase family protein | ALPR1_RS13065 | Not Available | Positive | 3125807 - 3126418 | 22849.7 |
| m23 family metallopeptidase | ALPR1_RS13070 | Not Available | Positive | 3126405 - 3128276 | 70605.7 |
| thioredoxin-dependent thiol peroxidase | ALPR1_RS13075 | Not Available | Positive | 3128307 - 3128756 | 16861.2 |
| transketolase | ALPR1_RS13080 | Not Available | Positive | 3128766 - 3129617 | 31421.2 |
| transketolase family protein | ALPR1_RS13085 | Not Available | Positive | 3129653 - 3130621 | 35115.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
