Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | ALPR1_RS12990 | Not Available | Positive | 3110145 - 3111302 | 42986.1 |
| acyltransferase | ALPR1_RS12995 | Not Available | Negative | 3111488 - 3112483 | 37963.5 |
| hypothetical protein | ALPR1_RS13000 | Not Available | Positive | 3112551 - 3113222 | 25452.7 |
| thiamine pyrophosphate-dependent enzyme | ALPR1_RS13005 | Not Available | Negative | 3113279 - 3115693 | 89873.1 |
| alanine dehydrogenase | ALPR1_RS13010 | Not Available | Positive | 3116127 - 3117245 | 40293.3 |
| outer membrane beta-barrel protein | ALPR1_RS13015 | Not Available | Positive | 3117448 - 3118032 | 21212.0 |
| lyse family translocator | ALPR1_RS13020 | Not Available | Negative | 3118074 - 3118706 | 22745.6 |
| gh3 auxin-responsive promoter family protein | ALPR1_RS13025 | Not Available | Negative | 3118703 - 3120253 | 59329.4 |
| yggs family pyridoxal phosphate-dependent enzyme | ALPR1_RS13030 | Not Available | Positive | 3120302 - 3120979 | 25731.2 |
| duf423 domain-containing protein | ALPR1_RS13035 | Not Available | Positive | 3120999 - 3121394 | 14188.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
