Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s8 family serine peptidase | ALPR1_RS12945 | Not Available | Negative | 3097375 - 3098649 | 45925.3 |
| tetratricopeptide repeat protein | ALPR1_RS12950 | Not Available | Positive | 3098938 - 3101136 | 83037.2 |
| s8 family peptidase | ALPR1_RS12955 | Not Available | Negative | 3101247 - 3102632 | 50764.6 |
| ppk2 family polyphosphate kinase | ALPR1_RS12960 | Not Available | Negative | 3102775 - 3103653 | 34784.3 |
| acyltransferase family protein | ALPR1_RS12965 | Not Available | Positive | 3103777 - 3104922 | 42927.8 |
| duf5655 domain-containing protein | ALPR1_RS12970 | Not Available | Positive | 3105398 - 3105955 | 21056.5 |
| s9 family peptidase | ALPR1_RS12975 | Not Available | Positive | 3106053 - 3108338 | 87477.2 |
| duf3109 family protein | ALPR1_RS12980 | Not Available | Negative | 3108396 - 3108959 | 21223.2 |
| duf4442 domain-containing protein | ALPR1_RS12985 | Not Available | Negative | 3109010 - 3109483 | 18125.1 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 3109700 - 3110127 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
