Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yced family protein | ALPR1_RS12890 | Not Available | Positive | 3085202 - 3085768 | 22287.0 |
| 50s ribosomal protein l32 | ALPR1_RS12895 | Not Available | Positive | 3085787 - 3085978 | 7401.17 |
| beta-ketoacyl-acp synthase iii | ALPR1_RS12900 | Not Available | Positive | 3086209 - 3087207 | 36177.4 |
| elongation factor p | ALPR1_RS12905 | Not Available | Positive | 3087232 - 3087795 | 20907.2 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | ALPR1_RS12910 | Not Available | Positive | 3087887 - 3088357 | 16514.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | ALPR1_RS12915 | Not Available | Positive | 3088380 - 3089729 | 49595.6 |
| hypothetical protein | ALPR1_RS12925 | Not Available | Negative | 3090535 - 3091056 | 18970.2 |
| psd1 and planctomycete cytochrome c domain-containing protein | ALPR1_RS12930 | Not Available | Positive | 3091398 - 3093710 | 87371.1 |
| duf1501 domain-containing protein | ALPR1_RS12935 | Not Available | Positive | 3093712 - 3095166 | 54127.5 |
| c-type cytochrome domain-containing protein | ALPR1_RS12940 | Not Available | Positive | 3095174 - 3097297 | 80053.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
