Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase family protein | ALPR1_RS12840 | Not Available | Negative | 3072442 - 3075819 | 126629.0 |
| acetyl-coa hydrolase/transferase family protein | ALPR1_RS12845 | Not Available | Positive | 3076059 - 3077354 | 47278.9 |
| sugar porter family mfs transporter | ALPR1_RS12850 | Not Available | Positive | 3077418 - 3078764 | 49482.0 |
| carbohydrate kinase family protein | ALPR1_RS12855 | Not Available | Positive | 3078768 - 3079640 | 32596.4 |
| hit family protein | ALPR1_RS12860 | Not Available | Negative | 3079803 - 3080195 | 14612.2 |
| transcription elongation factor grea | ALPR1_RS12865 | Not Available | Negative | 3080238 - 3080711 | 16992.3 |
| 2-hydroxyacid dehydrogenase | ALPR1_RS12870 | Not Available | Negative | 3080874 - 3081803 | 35216.9 |
| magnesium transporter | ALPR1_RS12875 | Not Available | Negative | 3081813 - 3083180 | 50682.5 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | ALPR1_RS12880 | Not Available | Negative | 3083167 - 3083952 | 29732.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | ALPR1_RS12885 | Not Available | Positive | 3084071 - 3085087 | 36931.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
