Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | ALPR1_RS12790 | Not Available | Positive | 3061872 - 3062801 | 34573.9 |
| duf4412 domain-containing protein | ALPR1_RS12795 | Not Available | Positive | 3062880 - 3063815 | 34753.9 |
| dihydrofolate reductase | ALPR1_RS12800 | Not Available | Positive | 3063887 - 3064387 | 18893.7 |
| sdr family oxidoreductase | ALPR1_RS12805 | Not Available | Positive | 3064391 - 3065176 | 28676.8 |
| competence/damage-inducible protein a | ALPR1_RS12810 | Not Available | Positive | 3065192 - 3066442 | 46073.7 |
| dihydrolipoamide acetyltransferase family protein | ALPR1_RS12815 | Not Available | Positive | 3066537 - 3067835 | 47217.8 |
| pas domain-containing sensor histidine kinase | ALPR1_RS12820 | Not Available | Negative | 3067869 - 3070721 | 107752.0 |
| cache domain-containing protein | ALPR1_RS12825 | Not Available | Negative | 3070711 - 3071727 | 38795.1 |
| hypothetical protein | ALPR1_RS12830 | Not Available | Negative | 3071753 - 3071992 | 9587.59 |
| osmc family protein | ALPR1_RS12835 | Not Available | Negative | 3071989 - 3072405 | 15207.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
