Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine--trna ligase | ALPR1_RS12590 | Not Available | Negative | 3015325 - 3017949 | 98587.5 |
| alanine racemase | ALPR1_RS12595 | Not Available | Positive | 3018277 - 3019383 | 41037.2 |
| srpbcc family protein | ALPR1_RS12600 | Not Available | Positive | 3019408 - 3019899 | 18986.3 |
| stas/sec14 domain-containing protein | ALPR1_RS12605 | Not Available | Positive | 3019919 - 3020308 | 14963.2 |
| alpha-ketoglutarate-dependent dioxygenase alkb | ALPR1_RS12610 | Not Available | Positive | 3020325 - 3020906 | 21800.7 |
| duf2306 domain-containing protein | ALPR1_RS12615 | Not Available | Positive | 3020946 - 3021596 | 24563.6 |
| cora family divalent cation transporter | ALPR1_RS12620 | Not Available | Positive | 3021657 - 3022610 | 37373.1 |
| hypothetical protein | ALPR1_RS12625 | Not Available | Negative | 3022702 - 3023289 | 21409.6 |
| esterase | ALPR1_RS12630 | Not Available | Positive | 3023859 - 3025055 | 44765.6 |
| alpha/beta hydrolase | ALPR1_RS12635 | Not Available | Positive | 3025120 - 3025983 | 32702.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
