Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40/yvtn/bnr-like repeat-containing protein | ALPR1_RS12540 | Not Available | Positive | 3002997 - 3006131 | 115838.0 |
| hypothetical protein | ALPR1_RS12545 | Not Available | Negative | 3006242 - 3007084 | 30656.0 |
| dtdp-glucose 4,6-dehydratase | ALPR1_RS12550 | Not Available | Negative | 3007318 - 3008373 | 39768.5 |
| nad-dependent epimerase | ALPR1_RS12555 | Not Available | Negative | 3008384 - 3009436 | 39385.9 |
| glycosyltransferase family 4 protein | ALPR1_RS12560 | Not Available | Negative | 3009476 - 3010642 | 43561.4 |
| helix-turn-helix transcriptional regulator | ALPR1_RS12565 | Not Available | Negative | 3010732 - 3010932 | 7522.03 |
| hypothetical protein | ALPR1_RS12570 | Not Available | Negative | 3011038 - 3011454 | 15974.8 |
| pyrroline-5-carboxylate reductase | ALPR1_RS12575 | Not Available | Positive | 3011636 - 3012439 | 28873.4 |
| tlpa disulfide reductase family protein | ALPR1_RS12580 | Not Available | Negative | 3012727 - 3013836 | 41716.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | ALPR1_RS12585 | Not Available | Negative | 3013840 - 3015303 | 54401.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
