Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iv | ALPR1_RS12490 | Not Available | Negative | 2991446 - 2992258 | 30488.7 |
| l-serine ammonia-lyase, iron-sulfur-dependent subunit beta | ALPR1_RS12495 | Not Available | Positive | 2992423 - 2993100 | 24582.7 |
| tolc family protein | ALPR1_RS12500 | Not Available | Positive | 2993115 - 2994452 | 49453.4 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS12505 | Not Available | Positive | 2994456 - 2995751 | 46677.6 |
| maf family nucleotide pyrophosphatase | ALPR1_RS12510 | Not Available | Negative | 2995825 - 2996415 | 22629.9 |
| duf1015 domain-containing protein | ALPR1_RS12515 | Not Available | Negative | 2996396 - 2997694 | 50234.4 |
| acetyl-coa carboxylase biotin carboxylase subunit | ALPR1_RS12520 | Not Available | Negative | 2997697 - 2999190 | 55224.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | ALPR1_RS12525 | Not Available | Positive | 2999383 - 3000633 | 46015.6 |
| histone h1 | ALPR1_RS12530 | Not Available | Positive | 3000737 - 3000913 | 6651.88 |
| m1 family metallopeptidase | ALPR1_RS12535 | Not Available | Negative | 3000980 - 3002818 | 70081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
