Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS12435 | Not Available | Negative | 2979188 - 2980366 | 44388.6 |
| duf4097 family beta strand repeat-containing protein | ALPR1_RS12440 | Not Available | Negative | 2980943 - 2981890 | 33716.8 |
| antibiotic biosynthesis monooxygenase family protein | ALPR1_RS12445 | Not Available | Positive | 2982193 - 2982510 | 12271.5 |
| hypothetical protein | ALPR1_RS12450 | Not Available | Positive | 2982540 - 2983148 | 22253.5 |
| alpha/beta hydrolase | ALPR1_RS12455 | Not Available | Positive | 2983154 - 2984221 | 40088.2 |
| sialate o-acetylesterase | ALPR1_RS12460 | Not Available | Negative | 2984247 - 2986154 | 70680.6 |
| cell division protein ftsa | ALPR1_RS20820 | Not Available | Negative | 2986239 - 2986712 | 17100.1 |
| xylose isomerase | ALPR1_RS12475 | Not Available | Negative | 2986820 - 2988133 | 49401.1 |
| xylulokinase | ALPR1_RS12480 | Not Available | Negative | 2988163 - 2989665 | 54916.0 |
| sodium/sugar symporter | ALPR1_RS12485 | Not Available | Negative | 2989683 - 2991326 | 59191.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
