Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 259659 - 259742 | Not Available |
| giy-yig nuclease family protein | ALPR1_RS01200 | Not Available | Positive | 259787 - 260020 | 9042.92 |
| betaine-aldehyde dehydrogenase | ALPR1_RS01205 | Not Available | Positive | 260405 - 261856 | 52495.6 |
| mechanosensitive ion channel family protein | ALPR1_RS01210 | Not Available | Positive | 261928 - 262779 | 31357.7 |
| nucleoside triphosphate pyrophosphohydrolase family protein | ALPR1_RS01215 | Not Available | Negative | 262782 - 263249 | 17357.7 |
| diaminopimelate epimerase | ALPR1_RS01220 | Not Available | Positive | 263525 - 264298 | 28502.8 |
| preprotein translocase subunit seca | ALPR1_RS01225 | Not Available | Positive | 264398 - 267775 | 126893.0 |
| hypothetical protein | ALPR1_RS01230 | Not Available | Positive | 267787 - 268332 | 20503.9 |
| m20 metallopeptidase family protein | ALPR1_RS01235 | Not Available | Positive | 268313 - 269503 | 43341.2 |
| s1/p1 nuclease | ALPR1_RS01240 | Not Available | Positive | 269562 - 270335 | 30002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
