Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein yjdm | ALPR1_RS12385 | Not Available | Negative | 2967086 - 2967421 | 12018.4 |
| nad(p)/fad-dependent oxidoreductase | ALPR1_RS12390 | Not Available | Negative | 2967506 - 2968756 | 46838.9 |
| serine hydrolase domain-containing protein | ALPR1_RS12395 | Not Available | Positive | 2968921 - 2970135 | 45671.1 |
| 2tm domain-containing protein | ALPR1_RS12400 | Not Available | Positive | 2970235 - 2970522 | 11211.8 |
| dnaj c-terminal domain-containing protein | ALPR1_RS12405 | Not Available | Positive | 2970621 - 2971532 | 34668.9 |
| chaperone modulator cbpm | ALPR1_RS12410 | Not Available | Positive | 2971525 - 2971815 | 11300.8 |
| duf3500 domain-containing protein | ALPR1_RS12415 | Not Available | Positive | 2972601 - 2973611 | 38347.4 |
| alpha/beta hydrolase | ALPR1_RS12420 | Not Available | Positive | 2973682 - 2974524 | 31457.4 |
| tolc family protein | ALPR1_RS12425 | Not Available | Negative | 2974563 - 2976014 | 54305.9 |
| efflux rnd transporter permease subunit | ALPR1_RS12430 | Not Available | Negative | 2976001 - 2979153 | 114577.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
