Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | ALPR1_RS12285 | Not Available | Positive | 2942479 - 2943180 | 26888.7 |
| universal stress protein | ALPR1_RS12290 | Not Available | Negative | 2943175 - 2944017 | 32125.8 |
| 2-hydroxyacid dehydrogenase | ALPR1_RS12295 | Not Available | Negative | 2944029 - 2944949 | 34460.8 |
| duf2911 domain-containing protein | ALPR1_RS12300 | Not Available | Positive | 2945142 - 2945996 | 31915.8 |
| sodium:solute symporter | ALPR1_RS12305 | Not Available | Negative | 2946042 - 2947745 | 63763.2 |
| pig-l family deacetylase | ALPR1_RS12310 | Not Available | Negative | 2947849 - 2950311 | 91969.0 |
| acyloxyacyl hydrolase | ALPR1_RS12315 | Not Available | Negative | 2950389 - 2951522 | 43404.8 |
| tetratricopeptide repeat protein | ALPR1_RS12320 | Not Available | Negative | 2951718 - 2952926 | 45523.2 |
| dna gyrase subunit a | ALPR1_RS12325 | Not Available | Negative | 2952957 - 2955515 | 95602.5 |
| hypothetical protein | ALPR1_RS12330 | Not Available | Negative | 2955611 - 2956633 | 39175.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
