Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | ALPR1_RS11945 | Not Available | Positive | 2840446 - 2846088 | 217986.0 |
| pin domain-containing protein | ALPR1_RS11950 | Not Available | Positive | 2846092 - 2848410 | 88569.6 |
| duf413 domain-containing protein | ALPR1_RS20350 | Not Available | Positive | 2848560 - 2848946 | 15312.4 |
| hypothetical protein | ALPR1_RS11960 | Not Available | Positive | 2848962 - 2850572 | 61642.5 |
| hypothetical protein | ALPR1_RS11965 | Not Available | Positive | 2850562 - 2853432 | 110165.0 |
| hypothetical protein | ALPR1_RS11970 | Not Available | Negative | 2853425 - 2854057 | 25425.5 |
| sulfatase-like hydrolase/transferase | ALPR1_RS11975 | Not Available | Negative | 2854373 - 2856421 | 76900.7 |
| ragb/susd family nutrient uptake outer membrane protein | ALPR1_RS11980 | Not Available | Negative | 2856609 - 2858387 | 68255.6 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS11985 | Not Available | Negative | 2858400 - 2861570 | 116712.0 |
| duf4974 domain-containing protein | ALPR1_RS20815 | Not Available | Negative | 2861681 - 2861851 | 6530.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
