Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | ALPR1_RS01145 | Not Available | Negative | 251781 - 252122 | 12884.7 |
| comf family protein | ALPR1_RS01150 | Not Available | Positive | 252320 - 252898 | 21380.4 |
| yfit family bacillithiol transferase | ALPR1_RS01155 | Not Available | Positive | 252905 - 253438 | 20485.8 |
| sdr family nad(p)-dependent oxidoreductase | ALPR1_RS01160 | Not Available | Positive | 253472 - 254230 | 27109.5 |
| hypothetical protein | ALPR1_RS01165 | Not Available | Positive | 254266 - 254847 | 22487.8 |
| paai family thioesterase | ALPR1_RS01170 | Not Available | Positive | 254854 - 255300 | 16176.7 |
| rna methyltransferase | ALPR1_RS01175 | Not Available | Negative | 255290 - 255829 | 20239.5 |
| dna mismatch repair protein muts | ALPR1_RS01180 | Not Available | Positive | 255924 - 258530 | 98465.8 |
| helix-turn-helix domain-containing protein | ALPR1_RS01185 | Not Available | Positive | 258582 - 259391 | 31502.2 |
| Trna-gly | Not Available | Not Available | Positive | 259519 - 259591 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
