Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ALPR1_RS11895 | Not Available | Positive | 2826995 - 2827339 | 13120.8 |
| hypothetical protein | ALPR1_RS11900 | Not Available | Positive | 2827339 - 2828205 | 33230.8 |
| hypothetical protein | ALPR1_RS20340 | Not Available | Positive | 2828295 - 2828873 | 22966.7 |
| type i restriction-modification system subunit m | ALPR1_RS11910 | Not Available | Positive | 2829082 - 2831490 | 90629.8 |
| restriction endonuclease subunit s | ALPR1_RS20345 | Not Available | Positive | 2831481 - 2832635 | 43705.2 |
| type i restriction endonuclease subunit r | ALPR1_RS11920 | Not Available | Positive | 2832637 - 2835738 | 118367.0 |
| m48 family metallopeptidase | ALPR1_RS11925 | Not Available | Positive | 2835738 - 2836451 | 28892.2 |
| uvrd-helicase domain-containing protein | ALPR1_RS11930 | Not Available | Positive | 2836478 - 2839051 | 99691.8 |
| hypothetical protein | ALPR1_RS11935 | Not Available | Positive | 2839194 - 2839691 | 19333.6 |
| hypothetical protein | ALPR1_RS11940 | Not Available | Positive | 2839727 - 2840410 | 26253.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
