Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS11845 | Not Available | Positive | 2817491 - 2818204 | 26640.8 |
| tetratricopeptide repeat protein | ALPR1_RS11850 | Not Available | Negative | 2818625 - 2819227 | 22538.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ALPR1_RS11855 | Not Available | Negative | 2819244 - 2820059 | 28982.2 |
| glycosyltransferase | ALPR1_RS11860 | Not Available | Positive | 2820080 - 2821210 | 43029.1 |
| metal-dependent transcriptional regulator | ALPR1_RS11865 | Not Available | Positive | 2821541 - 2822203 | 24757.8 |
| thioredoxin family protein | ALPR1_RS11870 | Not Available | Positive | 2822435 - 2822887 | 17392.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | ALPR1_RS11875 | Not Available | Positive | 2822884 - 2824266 | 50782.1 |
| helix-turn-helix domain-containing protein | ALPR1_RS11880 | Not Available | Positive | 2824490 - 2824843 | 13467.7 |
| tyrosine-type recombinase/integrase | ALPR1_RS11885 | Not Available | Positive | 2824866 - 2826029 | 44556.8 |
| hypothetical protein | ALPR1_RS11890 | Not Available | Positive | 2826026 - 2826910 | 34170.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
