Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | ALPR1_RS11745 | Not Available | Negative | 2795532 - 2795807 | 10671.0 |
| lptf/lptg family permease | ALPR1_RS11750 | Not Available | Negative | 2795869 - 2797683 | 68798.1 |
| start-like domain-containing protein | ALPR1_RS11755 | Not Available | Negative | 2797756 - 2798151 | 15166.6 |
| Trna-met | Not Available | Not Available | Positive | 2798524 - 2798597 | Not Available |
| giy-yig nuclease family protein | ALPR1_RS11765 | Not Available | Positive | 2798925 - 2799188 | 10411.7 |
| nramp family divalent metal transporter | ALPR1_RS11770 | Not Available | Positive | 2799407 - 2800723 | 48023.9 |
| duf4038 domain-containing protein | ALPR1_RS11775 | Not Available | Negative | 2800755 - 2802383 | 62391.6 |
| 50s ribosomal protein l20 | ALPR1_RS11780 | Not Available | Negative | 2802510 - 2802854 | 12992.9 |
| 50s ribosomal protein l35 | ALPR1_RS11785 | Not Available | Negative | 2802966 - 2803160 | 7303.15 |
| translation initiation factor if-3 | ALPR1_RS11790 | Not Available | Negative | 2803185 - 2803739 | 21169.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
