Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | ALPR1_RS11695 | Not Available | Negative | 2785469 - 2785762 | 11686.9 |
| Trna-thr | Not Available | Not Available | Positive | 2785821 - 2785896 | Not Available |
| duf349 domain-containing protein | ALPR1_RS11705 | Not Available | Negative | 2786007 - 2788073 | 80140.8 |
| yqge/algh family protein | ALPR1_RS11710 | Not Available | Negative | 2788122 - 2788691 | 21789.9 |
| pyridoxamine 5'-phosphate oxidase | ALPR1_RS11715 | Not Available | Positive | 2788795 - 2789430 | 24272.0 |
| bacillithiol biosynthesis deacetylase bshb1 | ALPR1_RS11720 | Not Available | Negative | 2789431 - 2790150 | 27402.5 |
| peptidoglycan dd-metalloendopeptidase family protein | ALPR1_RS11725 | Not Available | Negative | 2790170 - 2791213 | 39624.2 |
| thioredoxin-disulfide reductase | ALPR1_RS11730 | Not Available | Negative | 2791223 - 2792167 | 34102.4 |
| rna polymerase sigma factor rpod/siga | ALPR1_RS11735 | Not Available | Negative | 2792355 - 2793218 | 32828.4 |
| polyribonucleotide nucleotidyltransferase | ALPR1_RS11740 | Not Available | Negative | 2793289 - 2795427 | 78074.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
