Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response endonuclease pdem | ALPR1_RS11195 | Not Available | Negative | 2655270 - 2655929 | 25003.4 |
| duf2147 domain-containing protein | ALPR1_RS11200 | Not Available | Positive | 2655999 - 2656433 | 16269.6 |
| homoserine o-acetyltransferase family protein | ALPR1_RS11205 | Not Available | Negative | 2656547 - 2657599 | 39148.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | ALPR1_RS11210 | Not Available | Negative | 2657603 - 2658907 | 47053.6 |
| carbonate dehydratase | ALPR1_RS11215 | Not Available | Negative | 2659290 - 2659943 | 24739.7 |
| sulp family inorganic anion transporter | ALPR1_RS11220 | Not Available | Negative | 2659940 - 2661481 | 54854.1 |
| argininosuccinate lyase | ALPR1_RS11225 | Not Available | Negative | 2661581 - 2662915 | 49819.0 |
| m20 family metallo-hydrolase | ALPR1_RS11230 | Not Available | Negative | 2662924 - 2664009 | 40001.6 |
| acetylglutamate kinase | ALPR1_RS11235 | Not Available | Negative | 2664025 - 2664825 | 29334.0 |
| acetylornithine carbamoyltransferase | ALPR1_RS11240 | Not Available | Negative | 2664845 - 2665807 | 35733.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
