Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase msra | ALPR1_RS10995 | Not Available | Positive | 2613729 - 2614310 | 22082.0 |
| duf6909 family protein | ALPR1_RS11000 | Not Available | Positive | 2614321 - 2615997 | 63423.7 |
| hypothetical protein | ALPR1_RS11005 | Not Available | Positive | 2616066 - 2616416 | 13135.7 |
| amidohydrolase | ALPR1_RS11010 | Not Available | Negative | 2616467 - 2617921 | 52660.6 |
| gamma-glutamyltransferase family protein | ALPR1_RS11015 | Not Available | Negative | 2617977 - 2619845 | 68145.8 |
| carboxypeptidase-like regulatory domain-containing protein | ALPR1_RS11020 | Not Available | Negative | 2619863 - 2620930 | 40806.9 |
| dead/deah box helicase | ALPR1_RS11025 | Not Available | Positive | 2621131 - 2622387 | 46098.7 |
| n-acetylmuramidase domain-containing protein | ALPR1_RS11030 | Not Available | Positive | 2622615 - 2623439 | 31100.1 |
| duf1572 family protein | ALPR1_RS11035 | Not Available | Positive | 2623455 - 2623901 | 17396.8 |
| phosphoglycerate dehydrogenase | ALPR1_RS11040 | Not Available | Negative | 2624070 - 2625962 | 70299.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
