Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS10895 | Not Available | Positive | 2585106 - 2585963 | 33308.5 |
| chromosome segregation protein smc | ALPR1_RS10900 | Not Available | Negative | 2586047 - 2589586 | 135889.0 |
| hypothetical protein | ALPR1_RS10905 | Not Available | Positive | 2590294 - 2590773 | 18186.4 |
| hypothetical protein | ALPR1_RS10910 | Not Available | Negative | 2590786 - 2592369 | 61364.3 |
| endonuclease domain-containing protein | ALPR1_RS10915 | Not Available | Positive | 2593119 - 2593517 | 15633.9 |
| helix-turn-helix transcriptional regulator | ALPR1_RS10920 | Not Available | Positive | 2594192 - 2595103 | 35163.6 |
| s8 family peptidase | ALPR1_RS10925 | Not Available | Positive | 2595193 - 2596758 | 56680.4 |
| m28 family peptidase | ALPR1_RS10930 | Not Available | Negative | 2597009 - 2599114 | 77737.9 |
| c40 family peptidase | ALPR1_RS10935 | Not Available | Negative | 2599107 - 2600270 | 43771.7 |
| amidohydrolase family protein | ALPR1_RS10940 | Not Available | Negative | 2600357 - 2601661 | 47291.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
