Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ALPR1_RS10840 | Not Available | Positive | 2570217 - 2572841 | 98429.1 |
| llm class flavin-dependent oxidoreductase | ALPR1_RS10845 | Not Available | Positive | 2574026 - 2575060 | 38150.9 |
| hypothetical protein | ALPR1_RS10850 | Not Available | Positive | 2575274 - 2575519 | 9523.12 |
| nad-dependent epimerase/dehydratase family protein | ALPR1_RS10855 | Not Available | Positive | 2575528 - 2576430 | 33864.2 |
| is200/is605 family transposase | ALPR1_RS10865 | Not Available | Positive | 2577149 - 2577589 | 17754.0 |
| duf4235 domain-containing protein | ALPR1_RS10870 | Not Available | Negative | 2578241 - 2578516 | 9964.33 |
| fasciclin domain-containing protein | ALPR1_RS10875 | Not Available | Positive | 2579054 - 2580037 | 34694.3 |
| hypothetical protein | ALPR1_RS10880 | Not Available | Negative | 2580306 - 2580611 | 11900.8 |
| duf3427 domain-containing protein | ALPR1_RS10885 | Not Available | Negative | 2580704 - 2583856 | 120866.0 |
| hnh endonuclease | ALPR1_RS10890 | Not Available | Positive | 2584020 - 2584970 | 36632.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
