Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase | ALPR1_RS10590 | Not Available | Positive | 2506130 - 2507032 | 34057.1 |
| omph family outer membrane protein | ALPR1_RS10595 | Not Available | Positive | 2507131 - 2507730 | 22360.1 |
| deoxyhypusine synthase family protein | ALPR1_RS10600 | Not Available | Positive | 2507831 - 2508802 | 36244.3 |
| ompa family protein | ALPR1_RS10605 | Not Available | Positive | 2508805 - 2510493 | 62193.2 |
| gfo/idh/moca family protein | ALPR1_RS10610 | Not Available | Negative | 2510548 - 2512005 | 53981.1 |
| beta-n-acetylhexosaminidase | ALPR1_RS10615 | Not Available | Positive | 2512228 - 2513823 | 58772.4 |
| alanine/glycine:cation symporter family protein | ALPR1_RS10620 | Not Available | Positive | 2513982 - 2515370 | 49632.1 |
| glycerate kinase | ALPR1_RS10625 | Not Available | Positive | 2515371 - 2516462 | 39232.4 |
| hypothetical protein | ALPR1_RS20945 | Not Available | Negative | 2516521 - 2516658 | 4681.94 |
| hypothetical protein | ALPR1_RS20810 | Not Available | Negative | 2516747 - 2516938 | 7757.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
