Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide mfs transporter | ALPR1_RS10540 | Not Available | Positive | 2494486 - 2495985 | 53726.8 |
| amidohydrolase family protein | ALPR1_RS10545 | Not Available | Negative | 2496150 - 2497580 | 53203.7 |
| tetr/acrr family transcriptional regulator | ALPR1_RS10550 | Not Available | Negative | 2497582 - 2498280 | 26604.4 |
| tyrosine--trna ligase | ALPR1_RS10555 | Not Available | Negative | 2498431 - 2499723 | 48058.1 |
| s41 family peptidase | ALPR1_RS10560 | Not Available | Positive | 2499913 - 2503146 | 121730.0 |
| blai/meci/copy family transcriptional regulator | ALPR1_RS10565 | Not Available | Negative | 2503220 - 2503549 | 13045.7 |
| acyl-coa desaturase | ALPR1_RS10570 | Not Available | Negative | 2503734 - 2504441 | 28485.4 |
| phage holin family protein | ALPR1_RS10575 | Not Available | Positive | 2504626 - 2504991 | 12874.5 |
| helix-turn-helix domain-containing protein | ALPR1_RS10580 | Not Available | Negative | 2504974 - 2505411 | 16705.2 |
| hypothetical protein | ALPR1_RS10585 | Not Available | Positive | 2505510 - 2506076 | 21686.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
