Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | ALPR1_RS10490 | Not Available | Positive | 2482781 - 2483713 | 33424.4 |
| hypothetical protein | ALPR1_RS10495 | Not Available | Negative | 2483694 - 2484080 | 14582.7 |
| sterol desaturase family protein | ALPR1_RS10500 | Not Available | Negative | 2484084 - 2485316 | 47941.4 |
| hypothetical protein | ALPR1_RS10505 | Not Available | Positive | 2485433 - 2485927 | 19333.9 |
| dna topoisomerase iv subunit b | ALPR1_RS10510 | Not Available | Positive | 2485950 - 2487845 | 71744.2 |
| dna gyrase/topoisomerase iv subunit a | ALPR1_RS10515 | Not Available | Positive | 2487936 - 2490554 | 98706.4 |
| trmh family rna methyltransferase | ALPR1_RS10520 | Not Available | Positive | 2490565 - 2491269 | 26887.9 |
| hypothetical protein | ALPR1_RS10525 | Not Available | Negative | 2491272 - 2491880 | 22965.8 |
| peptidylprolyl isomerase | ALPR1_RS10530 | Not Available | Negative | 2491983 - 2492417 | 15809.6 |
| phosphoenolpyruvate carboxykinase (atp) | ALPR1_RS10535 | Not Available | Negative | 2492541 - 2494142 | 59543.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
