Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | ALPR1_RS10335 | Not Available | Positive | 2451340 - 2452071 | 27876.2 |
| duf4442 domain-containing protein | ALPR1_RS10340 | Not Available | Negative | 2452068 - 2452574 | 18991.2 |
| m48 family metallopeptidase | ALPR1_RS10345 | Not Available | Positive | 2452668 - 2453465 | 29082.0 |
| 3'-5' exonuclease | ALPR1_RS10350 | Not Available | Negative | 2453506 - 2454309 | 30594.8 |
| udp-n-acetylmuramate--l-alanine ligase | ALPR1_RS10355 | Not Available | Negative | 2454367 - 2455722 | 50806.7 |
| lycopene cyclase domain-containing protein | ALPR1_RS10360 | Not Available | Positive | 2455858 - 2456541 | 26646.9 |
| replicative dna helicase | ALPR1_RS10365 | Not Available | Positive | 2456644 - 2458221 | 58234.3 |
| quinone oxidoreductase family protein | ALPR1_RS10370 | Not Available | Positive | 2458228 - 2459226 | 36082.2 |
| hypothetical protein | ALPR1_RS10375 | Not Available | Negative | 2459223 - 2459708 | 18626.2 |
| hypothetical protein | ALPR1_RS10380 | Not Available | Negative | 2459833 - 2460165 | 13212.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
