Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase | ALPR1_RS10080 | Not Available | Negative | 2392972 - 2394450 | 55402.5 |
| gbsr/marr family transcriptional regulator | ALPR1_RS10085 | Not Available | Positive | 2394664 - 2395125 | 18028.8 |
| tolc family protein | ALPR1_RS20740 | Not Available | Positive | 2395198 - 2395656 | 17094.7 |
| tolc family protein | ALPR1_RS20745 | Not Available | Positive | 2395745 - 2396524 | 29280.7 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS10100 | Not Available | Positive | 2396533 - 2397585 | 38625.3 |
| efflux rnd transporter permease subunit | ALPR1_RS10105 | Not Available | Positive | 2397588 - 2400746 | 114983.0 |
| hypothetical protein | ALPR1_RS10110 | Not Available | Positive | 2400778 - 2401008 | 9024.15 |
| m1 family metallopeptidase | ALPR1_RS10115 | Not Available | Negative | 2401064 - 2402749 | 65034.6 |
| methionyl-trna formyltransferase | ALPR1_RS10120 | Not Available | Positive | 2402911 - 2403819 | 33240.9 |
| hypothetical protein | ALPR1_RS10125 | Not Available | Positive | 2403997 - 2404743 | 27766.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
