Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | ALPR1_RS09980 | Not Available | Positive | 2368309 - 2369736 | 53391.0 |
| dps family protein | ALPR1_RS09985 | Not Available | Positive | 2370019 - 2370507 | 18522.0 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS09990 | Not Available | Negative | 2370623 - 2371651 | 37886.2 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | ALPR1_RS09995 | Not Available | Positive | 2371838 - 2372257 | 16005.6 |
| metal-dependent transcriptional regulator | ALPR1_RS10000 | Not Available | Negative | 2372273 - 2372932 | 24849.7 |
| tonb-dependent receptor | ALPR1_RS10005 | Not Available | Positive | 2373044 - 2375323 | 84097.0 |
| duf3347 domain-containing protein | ALPR1_RS10010 | Not Available | Negative | 2375382 - 2375915 | 19667.4 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS10015 | Not Available | Negative | 2376054 - 2377814 | 64419.8 |
| tolc family protein | ALPR1_RS10020 | Not Available | Negative | 2377811 - 2379061 | 47896.1 |
| efflux rnd transporter permease subunit | ALPR1_RS10025 | Not Available | Negative | 2379058 - 2382882 | 140685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
