Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | ALPR1_RS09885 | Not Available | Negative | 2349212 - 2350558 | 49821.4 |
| duf1080 domain-containing protein | ALPR1_RS09890 | Not Available | Negative | 2350572 - 2351957 | 51461.2 |
| thump domain-containing class i sam-dependent rna methyltransferase | ALPR1_RS09895 | Not Available | Positive | 2352127 - 2353290 | 44444.2 |
| duf4301 family protein | ALPR1_RS09900 | Not Available | Negative | 2353343 - 2354854 | 56259.0 |
| lytr/algr family response regulator transcription factor | ALPR1_RS09905 | Not Available | Negative | 2354955 - 2355707 | 28949.8 |
| sensor histidine kinase | ALPR1_RS09910 | Not Available | Negative | 2355704 - 2357524 | 70882.6 |
| histidine kinase | ALPR1_RS09915 | Not Available | Negative | 2357521 - 2358720 | 45432.6 |
| hypothetical protein | ALPR1_RS09920 | Not Available | Positive | 2359039 - 2360061 | 37349.0 |
| biotin-dependent carboxyltransferase family protein | ALPR1_RS09925 | Not Available | Negative | 2360098 - 2360961 | 32213.4 |
| 5-oxoprolinase subunit pxpb | ALPR1_RS09930 | Not Available | Negative | 2360958 - 2361656 | 26525.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
