Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | ALPR1_RS09645 | Not Available | Negative | 2296277 - 2297896 | 60863.7 |
| pkd domain-containing protein | ALPR1_RS09650 | Not Available | Positive | 2298059 - 2300992 | 105912.0 |
| gliding motility-associated c-terminal domain-containing protein | ALPR1_RS21000 | Not Available | Positive | 2300995 - 2301180 | 6992.22 |
| udp-glucose 4-epimerase gale | ALPR1_RS09655 | Not Available | Positive | 2301246 - 2302259 | 37137.2 |
| gh92 family glycosyl hydrolase | ALPR1_RS09660 | Not Available | Negative | 2302260 - 2304572 | 86982.0 |
| giy-yig nuclease family protein | ALPR1_RS21005 | Not Available | Negative | 2304780 - 2304878 | 3872.53 |
| giy-yig nuclease family protein | ALPR1_RS09665 | Not Available | Negative | 2305144 - 2305395 | 10060.2 |
| giy-yig nuclease family protein | ALPR1_RS09670 | Not Available | Negative | 2305542 - 2305793 | 10170.2 |
| giy-yig nuclease family protein | ALPR1_RS09675 | Not Available | Negative | 2305940 - 2306191 | 10103.2 |
| Trna-asp | Not Available | Not Available | Positive | 2306243 - 2306316 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
