Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5996 family protein | ALPR1_RS09545 | Not Available | Negative | 2270934 - 2271845 | 34805.2 |
| sir2 family nad-dependent protein deacylase | ALPR1_RS09550 | Not Available | Negative | 2271886 - 2272578 | 25963.1 |
| carboxypeptidase-like regulatory domain-containing protein | ALPR1_RS09555 | Not Available | Negative | 2272648 - 2273889 | 47878.6 |
| type i dna topoisomerase | ALPR1_RS09560 | Not Available | Negative | 2273917 - 2276241 | 87958.5 |
| sixa phosphatase family protein | ALPR1_RS09565 | Not Available | Positive | 2276397 - 2276864 | 17476.4 |
| pyridoxal phosphate-dependent aminotransferase | ALPR1_RS09570 | Not Available | Positive | 2277192 - 2278367 | 42640.4 |
| aec family transporter | ALPR1_RS09575 | Not Available | Positive | 2278381 - 2279523 | 42138.4 |
| duf1080 domain-containing protein | ALPR1_RS09580 | Not Available | Negative | 2279610 - 2280401 | 28913.2 |
| neutral zinc metallopeptidase | ALPR1_RS09585 | Not Available | Positive | 2280576 - 2281472 | 32713.4 |
| nramp family divalent metal transporter | ALPR1_RS09590 | Not Available | Negative | 2281481 - 2282707 | 43769.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
