Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | ALPR1_RS09285 | Not Available | Positive | 2210853 - 2215163 | 162362.0 |
| lytr/algr family response regulator transcription factor | ALPR1_RS09290 | Not Available | Negative | 2215183 - 2215893 | 27305.2 |
| hypothetical protein | ALPR1_RS09295 | Not Available | Negative | 2215897 - 2216241 | 13277.3 |
| hypothetical protein | ALPR1_RS09300 | Not Available | Negative | 2216231 - 2216665 | 16691.4 |
| response regulator | ALPR1_RS09305 | Not Available | Negative | 2216741 - 2217154 | 15908.6 |
| glycerophosphodiester phosphodiesterase | ALPR1_RS09310 | Not Available | Negative | 2217317 - 2218096 | 29211.1 |
| peptide-methionine (r)-s-oxide reductase msrb | ALPR1_RS09315 | Not Available | Positive | 2218248 - 2218688 | 16502.4 |
| hypothetical protein | ALPR1_RS20305 | Not Available | Negative | 2218852 - 2220078 | 47371.1 |
| gnat family n-acetyltransferase | ALPR1_RS20310 | Not Available | Positive | 2220289 - 2221224 | 35741.5 |
| polysaccharide biosynthesis/export family protein | ALPR1_RS09330 | Not Available | Positive | 2221357 - 2222181 | 30272.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
